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Wednesday, September 16, 2009
Toward the end of this episode of EconTalk, Nassim Taleb (Fooled by Randomness, The Black Swan) talks about religion and the history of medicine. He notes that one of the benefits of adhering to religious practices was that you probably avoided going to a doctor when you were in trouble -- you prayed to a god or whatever other supernatural entity your religion said would help you out. Why was this a benefit? Because before roughly 50 to 100 years ago, going to the doctor was worse than doing nothing. He bled you, gave your wife a disease by not washing his hands while delivering her baby, etc.
Basically, before very recent times, doctors were parasites. They did not specialize in healing you, but in conning you into thinking that they could heal you -- for a small fee -- all while making you worse, on average. This makes me think: there would have been a selection pressure on human beings to be skeptical of materialist claims about the world -- or at least about the nature of ourselves -- and thus, by default, to be naturally inclined toward supernatural beliefs. Of course, praying to Zeus might not have done an awful lot of good -- but at least it wouldn't have given you new infections like a hospital would, and at least it wouldn't have bled you dry. (And there may have been some benefit from all the social interactions that you got by attending religious services regularly vs. being socially isolated.) Natural selection operates on the tiniest differences in relative fitness, and for most of human existence there must have been more than a little difference in fitness between those who eagerly sought out the help of a medicine man / doctor and those who just went to church (or wherever) and prayed to the spirits instead. This may be an original hypothesis, but I don't claim so since I haven't read much on the various theories of why religion is part of human nature. Taleb came pretty close to saying so, but not explicitly. Most economists talk about what's rational or utility-maximizing, without making that final link to evolutionary fitness. To its credit, the idea has a pretty solid basis for the necessary differences in relative fitness between believers and non-believers. Labels: Evolution, Evolution of God, Medicine, Religion
Monday, August 31, 2009
The effect of economic recession on population health:Economic recessions have paradoxical effects on the mortality trends of populations in rich countries. Contrary to what might have been expected, economic downturns during the 20th century were associated with declines in mortality rates. In terms of business cycles, mortality is procyclical, meaning it goes up with economic expansions and down with contractions, and not countercyclical (the opposite), as expected. So while most nations enjoyed sustained declines in mortality during the last century, the pace of the decline has been slower during economic booms and greater during so-called busts. The first rigorous studies demonstrating this trend have appeared only in the past 9 years, although the concept is not new. In contrast, for poor countries, shared economic growth appears to improve health by providing the means to meet essential needs such as food, clean water and shelter, as well access to basic health care services. But after a country reaches $5000 to $10 000 gross national product (GNP) per capita (or gross domestic product or gross national income per capita, all of which are similar for our purposes here), few health benefits arise from further economic growth...Health trends in Sweden illustrate this effect. Greg Cochran told me about this phenomenon in regards to the Great Depression last year.
Tuesday, May 19, 2009
Skin-Derived TSLP Triggers Progression from Epidermal-Barrier Defects to Asthma:
Eczema (atopic dermatitis) is a common allergic skin inflammation that has a particularly high prevalence among children. Importantly, a large proportion of people suffering from eczema go on to develop asthma later in life. Although the susceptibility of eczema patients to asthma is well documented, the mechanism that mediates "atopic march"- the progression from eczema to asthma - is unclear. We used genetic engineering to generate mice with chronic skin-barrier defects and a subsequent eczema-like disorder. With these mice, we were able to investigate how skin-specific defects predisposed the lungs to allergic asthma. We identified thymic stromal lymphopoietin (TSLP), a cytokine that is secreted by barrier-defective skin into the systemic circulation, as the agent sensitizing the lung to allergens. We demonstrated that high systemic levels of skin-derived TSLP were both required and sufficient to render lung airways hypersensitive to allergens. Thus, these data suggest that early treatment of skin-barrier defects to prevent TSLP overexpression, and systemic inhibition of TSLP, may be crucial in preventing the progression from eczema to asthma.
Tuesday, September 25, 2007
In my post below I respond to Bryan Caplan's critique of Greg Clark's claim that disease can increase per capita income because it reduces population (i.e., same population has a bigger resource base to work with).1 I go the route of the two handed economist by suggesting that whether Clark or Caplan is right depends on the details.2 Herrick adds in the comments:
Caplan's big claim is that almost anything that persistently raises death rates is likely to persistently reduce output per living worker. It that true? As I suggest below I think that Caplan is wrong if he wants to claim that productivity is always decreased in direct proportion to the increased disease load (ergo, death rate) of a population. This would prevent the rise in incomes which Clark predicts as the lower productivity of each individual means that the same amount of land can support fewer people at or above subsistence. In A Farewell to Alms Clark reports a rise in incomes after the Black Death, and, amongst native peoples in the New World after Old World diseases ravaged them. Obviously this is one extreme cause: a highly lethal infectious disease which cuts down a large proportion of the population very quickly, and then recedes. The other scenario is a case where there is an endemic infection which reduces physiological fitness across the whole population, reducing lifespan and increasing death rates, but also dampening economic productivity. Then there are cases where there is a wide variance within the population in regards to susceptibility toward infectious agents. This might be more like the first scenario, a large number of people die very quickly, while many others are spared because of some immunity. And so on. From Darwinian first principles it seems that there should be a large number of pathogens which are infectious but not fatal. Though reducing physiological fitness, they don't knock out their host because to do so would result in their own reduced evolutionary fitness. But hey, Herrick asked for expert opinion. I was actually hoping that someone with medical expertise (e.g., tropical diseases?) would weigh in on that thread, but that didn't happen. So I come to you with open hands and ask you to enlighten.... Update: Greg Clark responds directly to the Caplan critique. As a non-economist I'm more interested in what the empirical historical data says, and what little I know seems to agree with the general thrust of Clark's point. 1 - That sentence should filter out chimpanzee readers since it should be totally incomprehensible to them. 2 - No shit it depends on the details! Labels: Medicine
Thursday, July 05, 2007
One of the interesting findings to come from the recent burst of genome-wide association studies is that many seemingly disparate phenotypes share some genetic pathways. I don't think many people would have a priori considered the possibility of a genetic link between prostate cancer and type II diabetes, yet that's what the data suggest. Other links are somewhat more predictable-- type I diabetes and Crohn's disease both have an autoimmune component, so a genetic link might have been expected. And cornary heart disease and type II diabetes share some envronmental risk factors, so perhaps it's to be expected that similar genetic networks play a role in the two.
These genetic links have all been uncovered by classic reductionist methods-- find the molecular variation that predisposes to disease 1, find the molecular variation that predisposes to disease 2, and compare the two sets. It's simple, and it works. However, a clever new paper takes a different approach: Geneticists and epidemiologists often observe that certain hereditary disorders cooccur in individual patients significantly more (or significantly less) frequently than expected, suggesting there is a genetic variation that predisposes its bearer to multiple disorders, or that protects against some disorders while predisposing to others. We suggest that, by using a large number of phenotypic observations about multiple disorders and an appropriate statistical model, we can infer genetic overlaps between phenotypes. Our proof-of-concept analysis of 1.5 million patient records and 161 disorders indicates that disease phenotypes form a highly connected network of strong pairwise correlations. Our modeling approach, under appropriate assumptions, allows us to estimate from these correlations the size of putative genetic overlaps.This is data mining at its finest. I'll admit I didn't go through all of the hundreds of pages of supplementary material, but this is fascinating stuff. The authors seem to be particularly interested in autism, which they find correlates with a number of neurological disorders, but also bacterial and viral infections and autoimmune disease: Our estimated significant overlap between autism and tuberculosis may indicate that both diseases are associated with genetic changes weakening the immune systemOr consider the overlap between bipolar disorder and breast cancer: Although the competitive genetic overlap between bipolar disorder and female breast cancer has not been reported, there is recent indirect evidence that supports it: a well-established breast cancer drug, tamoxifen, was recently discovered to be effective in treating symptoms of bipolar disorder.The amount of data generated by the medical community each day is staggering, and as genetic information gets cheaper, it will increasingly be a part of that data. Half the game is knowing what to look for.
Wednesday, May 16, 2007
I realize I'm sort of beating a dead horse by reporting every single high-profile genome-wide association scan (for example), but it's worth pointing out their successes, as there was serious opposition to the HapMap project that laid the groundwork for these studies. So in that spirit, I'll point out this paper, which identifies a common variant in the FTO gene as being associated with obesity:
An additive association of the variant with BMI was replicated in 13 cohorts with 38,759 participants. The 16% of adults who are homozygous for the risk allele weighed about 3 kilograms more and had 1.67-fold increased odds of obesity when compared with those not inheriting a risk allele. This association was observed from age 7 years upward and reflects a specific increase in fat mass.One of the most important points about genome-wide association studies is that they're (more or less) unbiased-- that is, you don't have to think about which genes could be involved in the phenotype before studying it. Some people consider this a liability, some a blessing. I'm in the latter group, as a strong signal in a genome-wide association can in some cases lead to new candidate genes, new hypotheses and expose interesting biology. This is precisely one of those cases. Here's what's known about the gene identified in this study: FTO is a gene of unknown function in an unknown pathway that was originally cloned as a result of the identification of a fused-toe (Ft) mutant mouse that results from a 1.6-Mb deletion of mouse chromosome 8. Three genes of unknown function (Fts, Ftm and Fto), along with three members of the Iroquois gene family (Irx3, Irx5, and Irx6 from the IrxB gene cluster), are deleted in Ft mice. The homozygous Ft mouse is embryonically lethal and shows abnormal development, including left/right asymmetry. Heterozygous animals survive and are characterized by fused toes on the forelimbs and thymic hyperplasia but have not been reported to have altered body weight or adiposity. The fused-toe mutant is a poor model for studying the role of altered Fto activity, because multiple genes are deleted. Neither isolated inactivation nor overexpression of Fto has been described.So essentially, nothing is known about this gene. Thanks to this study, this is unlikely to be the case for long. Labels: Association, Medicine
Friday, May 04, 2007
One of the most consistent complaints about medical genetics research is that it's great at finding the gene/genes underlying a disease, but finding the gene/genes doesn't necessarily lead to any sort of treatment. The genes for cystic fibrosis and Duchenne muscular dystrophy, for example, were both identified in the late '80s. Both remain uncured. In fact, the genes underlying a large number of so-called "Mendelian" diseases (named because they are essentually due to defects in a single gene, unlike "complex" or "multifactorial" diseases) were identified in a mad rush after the realization in 1980 that disease genes could be found without knowing anything a priori about a disease or its genetics. As far as I know, no treatments have come out of these studies.
But as they say, Rome was not built in a day. If the precise genetic defect underlying a disease can be indentified, someone will find a way to fix it, though it may take many years, new technologies, and a lot of luck. So it's heartening to see a report in this week's Nature on the identification of a compound that may one day be a treatment for disorders caused by nonsense mutations (mutations that cause a truncated protein). From the abstract: Nonsense mutations promote premature translational termination and cause anywhere from 5-70% of the individual cases of most inherited diseases. Studies on nonsense-mediated cystic fibrosis have indicated that boosting specific protein synthesis from <1% to as little as 5% of normal levels may greatly reduce the severity or eliminate the principal manifestations of disease. To address the need for a drug capable of suppressing premature termination, we identified PTC124-a new chemical entity that selectively induces ribosomal readthrough of premature but not normal termination codons.Clinical trials have apparently been initiated; this is a story to watch. |