Genomic ancestry tests are not cons, part 2: the problem of ethnicity

The results to the left are from 23andMe for someone whose paternal grandparents were immigrants from southern Germany. Their mother had a father who was of English American background (his father was a Yankee American with an English surname and his mother was an immigrant from England), and grandparents who were German (Rhinelander) and French Canadian respectively on their maternal side.

Looking at the results from 23andMe one has to wonder, why is this individual only a bit under 25% French & German, when genealogical records show places of birth that indicates they should be 75% French & German (more precisely, 62.5% German and 12.5% French). Though their ancestry is 25% English, only 13% of their ancestry is listed as such.

First, notice that nearly half of their ancestry is “Broadly Northwestern European.” Last I  checked  23andMe uses phased haplotypes to detect segments of ancestry. This is a very powerful method and is often quite good at zeroing in on people of European ancestry. But with Americans of predominant, but mixed, Northern European background rather than giving back precise proportions often you obtain results of the form of “Broadly…” because presumably, recombination has generated novel haplotypes in white Americans.

But this isn’t the whole story. Why, for example, are many of the Finnish people I know on 23andMe assigned as >90% Finnish, while a Danish friend is 40% Scandinavian?

The issue here is that to be “Finnish” and “Scandinavian” are not equivalent units in terms of population genetics. Finns are a relatively homogeneous ethnic group who seem to have undergone a recent population bottleneck. In contrast, Scandinavia encompasses several different, albeit related, ethnicities which are geographically widely distributed.

Ethnic identities are socially and historically constructed. Additionally, they are often clear and distinct. This is not always the case for population genetic classifications. On a continental scale, racial classification is trivial, and feasible with only a modest number of genetic markers. Why? Because the demographic and evolutionary history of Melanesians and West Africans, to give two concrete examples, are distinct over tens of thousands of years. Population genetic analyses which attempt to identify or differentiate these groups have a lot of raw material to work with.

Read More

Video is for consumption and text is for production

The Information has a piece up, The Case Against Video. The Information charges a decent amount for its services which are in text form, so of course there is some bias here insofar as this belief was probably preexistent.

But I happen to agree. It strikes me that video is relatively low density, and it often takes reading to be able to combine facts/concepts together to form something new. It can be done via video, but it ends up taking more time.

For most people video will be sufficient, just as for most people television news is sufficient. But real depth will require reading.

Smartphones killed the fabulist


In The Wall Street Journal Nicholas Carr has a bizarre but unsurprising op-ed, How Smartphones Hijack Our Minds:
Research suggests that as the brain grows dependent on phone technology, the intellect weakens
. By the title, you can immediately pick out tells that should induce skepticism. “Research suggests” is usually indicating that the author has a hypothesis, and they went and searched the literature for research that confirmed their hypothesis. Carr actually did better than much of modern journalism. He found peer-reviewed literature, instead of quote mining, or selective elisions. Journalism, you have a story to tell, and you’ll make someone else tell it!

And to his credit, Carr cites the publications transparently, with links. Unfortunately, you see that in some cases the sample sizes are very small, and the statistical significance is marginal. In other instances, it doesn’t seem like there’s any real causality. One can’t know if there is a confound with who decides to take phones to class and who does not. It may be that those students who are very focused simply don’t take their phones. Finally, a lot of the research cited in the piece looks like it was sliced and diced to me.

This is where a little history and cognitive neuroscience would go a long way. Traditionalists have inveighed against new information technologies for the whole history of the human race. No doubt when complex syntax emerged some spoiled-sport argued that it was being abused to gossip and waste time.

Most people know that some of the ancient Greeks worried that the spread of literacy was eroding the power of memory. Less well known is that the printing press helped usher in the final decline of the art of memory.

And literacy does rewire our brains. In Reading in the Brain Stanislas Dehaene outlines just how certain regions of the brain focused on shape perception are co-opted to recognize letters effortlessly. This may not be without cost. Muhammed Ali was semi-literate, in part due to dyslexia, and a recent biographer has argued that he had better visual-spatial abilities in part because he didn’t waste his attention and focus on learning to read instinctively.

Nicholas Carr has now built a career in large part on skepticism of the internet and information technology. He knows exactly how to write viral stories which travel on the internet by criticizing the internet.

And it is certainly hard to deny the distracting effect of the internet. But that’s looking at the glass half-empty. One of the positives of the ubiquity of smartphones is that it has forced the retirement of so many bullshitters. Today people can make something up, and you can just “look it up.” Everyone is fact-checking everyone, and distracting from the fabulous bullshit stories and “facts” that a certain type of person has always specialized in.

Like free trade, it’s easy to see the downsides of the internet, and mine the social science literature to “prove” that you’re right. That’s one of the benefits of the internet, it lets you find scientific research which can confirm any assertion you make under heaven. Carr’s leveraging the literature to service his likely false arguments is one of the internet’s downsides.

Burma can thank the British for its current mess

Since my last post on the Rohingya I’ve kept reading up on the topic, mostly in relation to their origins. Google scholar has been of minimal help to be honest, though this draft of a presentation given to Southeast Asia scholars in 2014 has been one of the better analyses I’ve seen, with lots of citations that you can follow up.

For me the biggest hard fact that one can not deny is that there was massive increase in the number of Muslims in Arakan recorded in the censuses of 1871, 1901, and 1911. The number of Muslims tripled in this period, and work out to an annual growth rate of 5.5%; far above anything recorded in South and Southeast Asia at the time (where growth rates were closer to 1%).

The most plausible model seems to be that most of the self-identified Rohingya in Burma today descend from a population which was part of the broader migration of peoples from the Indian subcontinent during the period of the British Raj. Between 1874 and 1917 nearly 100,000 Indians emigrated to Trinidad. In fact millions of Indian peasants were sent to far flung regions of the British Empire in the period between 1830 and 1920 (as well as merchants and traders to East Africa and elsewhere).

So where does this idea of Rohingya being in Arakan for 900 years come from? There are many websites on the internet litigating the Rohingya issue from both sides. Let me quote from one such site, Voice of the Rohingya:

The Origin of Rohingya

Rohang, the old name of Arakan, was very familiar region for the Arab seafarers even during the pre-Islamic days. Tides of people like the Arabs, Moors, Turks, Pathans, Moghuls, Central Asians, Bengalees came mostly as traders, warriors, preachers and captives overland or through the sea route. Many settled in Arakan, and mixing with the local people, developed the present stock of people known as ethnic Rohingya. Hence, the Rohingya Muslims, whose settlements in Arakan date back to 7th century AD are not an ethnic group which developed from one tribal group affiliation or single racial stock. They are an ethnic group developed from different stocks of people. The ethnic Rohingya is Muslim by religion with distinct culture and civilisation of their own. They trace their ancestry to Arabs, Moors, Pathans, Moghuls, Central Asians, Bengalis and some Indo-Mongoloid people. Since Rohingyas are mixture of many kinds of people, their cheekbone is not so prominent and eyes are not so narrow like Rakhine Maghs and Burmans. Their noses are not flat and they are a bit taller in stature than the Rakhine Maghs but darker in complexion. They are some bronzing coloured and not yellowish. The Rohingyas of Arakan still carried the Arab names, faith, dress, music and customs. So, the Rohingyas are nationals as well as an indigenous ethnic group of Burma. They are not new born racial group of Arakan rather they are as old an indigenous race of the country as any others.

The Origin of Rakhine

In the year 957 AD, a Mongolian invasion swept over Vesali, and killed Sula Chandra, the last king of Chandra dynasty. They destroyed Vesali and placed on their throne Mongolian kings. Within a few years the Hindus of Bengal were able to establish their Pala Dynasty. But the Hindus of Vesali were unable to restore their dynasty because of the invasion and migrations of Tibeto-Burman who were so great that their population over shadowed the Vesali Hindus. They cut Arakan away from Indians and mixing in sufficient number with the inhabitants of the eastern-side of the present Indo-Burma divide, created that Indo-Mongoloid stock now known as the Rakhine Arakanese. This emergence of a new race was not the work of a single invasion. But the date 957 AD may be said to mark the appearance of the Rakhine in Arakan, and the beginning of fresh period.

If you didn’t connect the dots here, what is going on is that the Rohingya are being presented as the more indigenous population of Arakan in comparison to the Rakhine majority in the text above! This is almost certainly wrong in any straightforward reading…but imagine how Rakhine react to this sort polemic, even though it is almost certainly a reaction to Rakhine nativism.

The Rohingya extensively cite their Arab and assorted West Asian antecedents in Arakan. The admission of a Bengali contribution is typical, but, it is rarely given outsized influence or importance. This, despite the fact that Rohingya are physically indistinguishable from the peasants of southeast Bengal, and their language closely resembles the Chittagong dialect of that area.

I can make judgments on the issues of physical appearance and language. My own family is from a nearby region (Comilla, and some branches of the family, Noakhali), and I have been to Chittagong. I can understand to some extent the Chittagong dialect, and the Rohingya language is clearly related to it (the peasant Bengali of the region of Bangladesh my family is from is almost certainly closer to Chittagong dialect than standard Bengali because of proximity).

But it does seem clear that some Muslims were present in Arakan at a relatively antique date. The romance of Sinbad the Sailor reflects that even in the period before 1000 AD Muslim travelers and traders were a common on the shipping lanes of the Indian ocean, even as far east as the trading entrepot of Guangzhou in Tang China. This can be confirmed by the fact that Muslim conflict with Chinese occurred in 758 and culminated with a well known massacre of foreigners, mostly Muslims, in 875. They were certainly in Arakan by this period in some numbers.

Nevertheless this Arab connection to Arakan is tenuous at best. The Muslims of Arakan are of the Hanafi school of shariah, which is dominant in the Turco-Persian-Indian world. In contrast, Arabs tended to transmit the Shafi school to the eastern shores of the Indian ocean. This is evident among the Muslims of Kerala, who have long had a relationship with southern coastal Arabia, and so adhere to the Shafi school unlike the vast majority of India’s Sunni Muslims (Southeast Asia is Shafi as well).

More concrete and substantive is the association of kingdom of Mrauk U with Islamicate civilization, and in particular the Sultanate of Bengal and later the Mughal Empire. This polity flourished between the 15th and 18th centuries. In the early period the Muslim rulers of Bengal to the north and west patronized the dialect of the region, what was becoming Bengali (elite support for Bengali among Muslims declined during the Mughal period). This is also when large scale Islamicization began on the eastern frontier according to The Rise of islam on the Bengal Frontier. A number of Muslims settled in Mrauk U during these centuries, often in association with the sultan’s court. It seems likely from the literature I have seen that the term Rohingya began to become popular among Muslims in Arakan during this period at the latest. Even before the British conquest of Arakan they noted the existence of a community of Muslims who called themselves Rohingya.

So what is the connection between the Rohingya, who certainly existed as a community in Arakan before British conquest, and the modern Rohingya, who probably descend from peasants who arrived from southeast Bengal in the 19th century?

First, one needs to be reminded that at in 1940 16% of Burma’s population was of recent Indian subcontinental origin. They spanned the gamut from wealthy Chettiar financiers to middle class Punjabi police to peasants from Bengal. In the decades after World War II the majority left the country, especially the prosperous ones. The literature I’ve read indicates that the less prosperous ones, who did not have portable skills or assets, were less likely to leave. Many of them have assimilated to Burmese culture in cities such as Yangon (many Hindus have switched their religious affiliation to Buddhism, while all Burmese with total fluency).

The Rohingya were drawn exclusively from a peasant culture, and exist in concentrations in a particular region where they are preponderant (northern Arakan), and so exhibit cultural critical mass. The Rohingya are by and large not a literate people. At least until recently. Though their language is clearly Indo-Aryan, and closely related to Bengali, they do not use Bengali script.

In Bangladesh there are two regions where Bengali-related dialects are extensively spoken. In Sylhet in the northeast and Chittagong in the southeast the local dialects are unintelligible with standard Bengali. But because Bengali is a dialect continuum (standard Bengali derives from a particular region of West Bengal, in what is today India) I have better understanding of Chittagong dialect that most Bengali speakers, as I also understand to some extent rural Comilla speech, which is nearer to the Chittagong dialect. People in Sylhet and Chittagong can generally speak standard Bengali, and though both groups exhibit some ambivalence they do consider themselves Bengali.

So why are the Rohingya different? The period when the Rohingya migrated to Burma was also the period when European-style conceptions of nationalism, based around a common written language, were starting to take hold in South Asia. South Asians of all religions, at least of an elite background, understood themselves as being part of Hindustan, which was characterized by its own unique traits. But their identity on a national level, bound by language, was weak. This is in part because the languages favored by the elites were Persian or Sanskrit, with the simultaneous emergence in North India of the dialects that later became Urdu and Hindi (South India had its own independent traditions).

In Germany, Italy, and France, the standard national languages spread in the 19th and 20th centuries so that local dialects went extinct. That process in a place like South Asia has been much slower because the illiterate agricultural peasant majority has been more insulated from literacy. Just as Italian is based on the dialect of Florence, so standard Bengali derives from a particular region in modern West Bengal, and spread as an elite language across the Bengali dialect continuum (when I was a very small child in Bangladesh my parents made an effort to speak in very standard Bengali so that that was my native language, as opposed to a lower status dialect).

From what I can tell the Rohingya were untouched by the changes triggered by the Bengali Renaissance in the early 19th century, which first captured the imaginations of the Bengali Hindu upper castes, and then spread over the decades to the middle classes of all both religions and all regions. In lieu of a Bengali identity the Rohingya seem to have co-opted the identity of the earlier Muslim community of Arakan, whom they likely absorbed. This is not entirely fantastical. I have some experience talking to peasants in the countryside of Bangladesh, and even now the lower classes are vague about their national and ethnic identity. Rather, they focus on their village and locality, and exhibit little sense of scale of difference in relation to outsiders. In 1990 when I was visiting rural Bangladesh I remember being introduced to a woman from Bogra district as a “fellow foreigner.” Bogra was less than 200 miles from where I was at the time, but for these peasants it was another world, and we were interchangeable in our alienness.

There is a clear analogy to what might be happening with the Rohingya, and that exists in the Central Asia. In the 19th and early 20th centuries a broad group of settled Turks and Iranians in Central Asia under Chinese nationalist and Russian rule transformed their ethnic identities into those we know today. Groups like Uyghurs and Uzbeks have tenuous connections to the historical groups which were called Uyghurs and Uzbeks. The decision of the various Turkic speaking groups of the oases of Xinjiang to call themselves Uyghur, and so established a connection to the Turkic confederation which flourished more than 1,000 years earlier, occurred in the 1920s. Of course today we don’t say that the Uyghurs aren’t real Uyghurs; the assent of the Turkic speaking population to the term Uyghur has resulted in that becoming their new self-identity.

Similarly, a reshaping of the self-identity of the people who became Rohingya in Burma likely occurred in the 20th century. Without an educated upper class which was literate they were totally detached from the emergence of a modern Bengali identity. Rather than become Bengali the more upwardly mobile members of the Rohingya elevated their own dialect into its own language (and adopted a non-Bengali script as well). Additionally,  they synthesized various aspects of Islamic history in Arakan and integrated it into their own identity, and so establishing their bona fides as sons of the soil.

To the question of whether Rohingya have been present in Arakan for 900 years, I think it is clear I believe that the answer there is no, not at all. But, to the question of whether they actually Bangladeshi, I would also have to say at this point, no. This is a subtle and nuanced issue, but the existence of a Bangladeshi national identity is relatively new, just as the nation is new. But it is has likely been on the order of 100 years or more since most of the ancestors of the Rohingya left the districts of southeastern Bengal to which they were originally native. Not only have the ancestors of the Rohingya never lived in Bangladesh, but they never lived in Pakistan. It would be somewhat similar to suggesting that an Indo-Trinidadian would be comfortable in India, though the gap here is larger because most Indo-Trinidadians lack fluency in any South Asian language today.

The non-Bengali identification of the Rohingya has also made their Islamic identity more salient. If you Google image Bangladeshi women as opposed to Rohingya women, the latter look far more Muslim. I’m no expert, but the Rohingya seem partial to the headscarves of the sort common in places like Malaysia, again attesting to their attempt, conscious or not, at indigenization. Without a connection to Bengali elite culture, which is multireligious, and of a secular bent due to that fact, the Rohingya will naturally gravitate toward an Islamic identity when they attempt to transcend their peasant origins.

Why does any of this matter? Obviously the truth matters. And if the world community is to foster peace in Burma it will not help its cause by promoting false narratives created by the Rohingya as a counterargument against those Burmese who deny their national status. The Rohingya have established their non-Bengali identity, as they have created a different one in Burma. But attempts to the deny their relatively recent origins in South Asia will almost certainly inflame and agitate the Rakhine majority and the Burmese state even more than is the case now. It will also undercut any credibility that outsider have in fostering moderation and peace.

The Ghosts of the European Pleistocene

2011’s Cave of Forgotten Dreams was a strange film. I went to watch it in the theaters mostly to see the paintings of Pleistocene peoples in an immersive manner, but the director and narrator, Werner Herzog, used the film as an instrument to forward his thesis that humanity as we understand it emerged during this period in the European Ice Age.

Whether he knew it or not Herzog was channeling the “Great Leap Forward” model of the origin of our species. That in an almost punctuated manner the cultural proteanism which we take to be a defining hallmark of our species emerged at some point deep in what we call the Ice Age. In The Dawn of Human Culture Richard Klein localized this burst of humanity ~50,000 years ago in Africa, and hypothesized that it was triggered by a biological change which enabled language fluency. In The Humans Who Went Extinct Clive Finlayson posits that cultural changes associated with the Gravettian people in central Eurasia eventually defined what he meant to be human, and explained the marginalization of Neanderthals.

To a rough approximation I’m skeptical of both these models. I don’t think humanity emerged fully formed like Athena over the last 50,000 years. Rather, humanity we understand humanity is deeply primal, and a feature of the root of our lineage, millions of years in the past. If Homo erectus populations were still around they deserve all the rights of humans, despite their numerous differences.

I suspect that we’ll found out that ‘behavioral modernity’ is a cocktail of soft selection on standing variation and cumulative cultural change. But that doesn’t mean that the Pleistocene history of Europe is not important or interesting. And recently we’ve obtained enough ancient DNA to sketch out a general picture of demographic, if not cultural, change.

Everyone should read The genetic history of Ice Age Europe. But I suspect the impact is going to get deeper when more archaeologists are familiar with the implications. Here is the abstract:

Modern humans arrived in Europe ~45,000 years ago, but little is known about their genetic composition before the start of farming ~8,500 years ago. We analyze genome-wide data from 51 Eurasians from ~45,000-7,000 years ago. Over this time, the proportion of Neanderthal DNA decreased from 3–6% to around 2%, consistent with natural selection against Neanderthal variants in modern humans. Whereas the earliest modern humans in Europe did not contribute substantially to present-day Europeans, all individuals between ~37,000 and ~14,000 years ago descended from a single founder population which forms part of the ancestry of present-day Europeans. A ~35,000 year old individual from northwest Europe represents an early branch of this founder population which was then displaced across a broad region, before reappearing in southwest Europe during the Ice Age ~19,000 years ago. During the major warming period after ~14,000 years ago, a new genetic component related to present-day Near Easterners appears in Europe. These results document how population turnover and migration have been recurring themes of European pre-history.

I modified the model of demographic turnover to the left, adding labels for the primary paleoanthropological cultural groups. Instead of starting with the archaeology the authors let the genetic results guide them. What they discover is that there were roughly four turnovers in population defined by four “clusters”:

– the first Europeans who succeeded the Neanderthals, who seem to have left no descendents

– the Goyet cluster, associated with Aurignacians

– the Vestonice cluster is associated with the Gravettians

– the El Miron cluster with the Gravettians

– the Villabruna cluster with various late Pleistocene cultures, and is the direct ancestor of Mesolithic hunter-gatherers present in Europe when the first farmers arrived

A quick calculation suggests that very little of the ancestry of modern Europeans has deep roots across much of the continent going back to before the Last Glacial Maximum ~20,000 years ago. The “Pleistocene” ancestry of Europeans mostly derives from the last group, the Villabruna cluster. In the paper the authors note that this group is unique for several reasons:

– some individuals in this cluster have an affinity with East Asians (earlier Pleistocene groups do not)

– more universally, individuals in the Villabruna cluster have a notable affinity with Middle Eastern populations which was not evident in earlier Pleistocene clusters

Recall Middle Eastern populations can be modeled as a mix of a West Eurasian group similar to European hunter-gatherers, and, “Basal Eurasians,” who are an outgroup to all non-Africans (European hunter-gatherers to Oceanians to Amerindians!). The authors posit that the gene flow is more likely from the Middle East, because earlier European clusters have affinities with Villabruna, but they share nothing with the Middle East. The Villabruna cluster does not have Basal Eurasian ancestry though. So we might be looking at complex population structure.

Two general issues that crop up in this paper are sampling limitations and population expansions into Europe from the east. The disappearance of Goyet ancestry, only to reappear as part of the El Miron cluster, is curious. Perhaps the post-Goyet people occupied ecologies less likely to be fossilized? It reminds us of the resurgence of hunter-gatherer ancestry in Europe of the Middle Neolithic. As for why there seems to be an eastern bias into intrusive populations into Europe, these groups may simply have had a larger population, and so been more likely to avoid meta-population extinction events?

Finally, the authors point out that Gravettian culture in Siberia and Europe does not seem to be genetically related. This suggests that these people were very modern, because a hallmark of the modernity is that ideas can move between groups without too much genetic exchange.

Europe has the best coverage of ancient DNA. What we find here are repeated population turnovers and a lot of complexity and contingency. Is Europe peculiar? There is circumstantial evidence from modern DNA that Australians are descendants of first settlers. And to some extent this is also true in the case of East Asians if the work reported out of the Fu lab holds up. South Asians though are more likely to be like Europeans, and Middle Easterners show some of the same dynamics during the Holocene.

Totality, 2017

We saw totality in Independence, Missouri. It was a pretty long car trip with the kids, all of whom are under school age (though just barely in the case of the eldest). We had a big fright because there was a massive thunderstorm in the morning…but it cleared out for a few hours. And that was when the total eclipse occurred.

Really words don’t do the experience justice.

Chase a total eclipse if you get a chance.

The past was not PG

The Week has published a screed against the low moral quality of Game of Thrones, Game of Thrones is bad — and bad for you. Obviously there is something to this insofar as one can see a coarsening of entertainment, or at least a decline in the stylized aspects of the depiction of reality.

But one of my initial reactions is that much of the narrative that we value from the past was not particularly PG. If you read The Harlot by the Side of the Road: Forbidden Tales of the Bible you see that the “Good Book”, in fact the only book many read front to back by many after the Reformation in Protestant Europe, has some quite unsavory tales. The story of Judah and Tamar in particular is hard to digest from a modern Western perspective because many of the elements are understated and workaday. Greek mythology is no better obviously. From Zeus raping Leda, Achilles throwing a fit because his sex-slave was taken away, to the tradition of Agamemnon sacrificing Iphigenia.

In some cases the shocking aspect of ancient stories is because moderns have different values. Slavery and concubinage were taken for granted during the period that the Hebrew Bible and Classical mythology crystallized into the forms which came down to us. In other cases I presume that it was unlikely that small children were going to ever read the original stories themselves, so sexual elements that might confuse were probably omitted in some oral tellings.

This is not to say that Game of Thrones is a modern masterpiece. But some of the disquieting, and frankly perverse, aspects of the narrative are only shocking if your standard is the relatively antiseptic literary fiction which one finds between the Regency and the cultural revolution of the 1960s. That is the aberration in human history, while gritty genre fiction much closer to primal human storytelling.

Open Thread, 07/09/2017

I’m a sucker for the aesthetics of Norden. Why? I wonder if part of it is that the fringe of Northern Europe is a science fictional setting. The long dark nights during the cold winter, and the twilight during midsummer. The sun may be bright, it never gets too high in the sky. The 13th Warrior wasn’t the best movie, but it was evocative. One of the problems with the film depiction of the Lord of the Rings trilogy is that New Zealand seems too bright and airy (and also not decayed enough).

Because of the SMBE meeting I haven’t made much progress on The Enigma of Reason. Much of it has been reviewing the literature in cognitive psychology and reasoning which I’m familiar with (system 1 vs. system 2, Wason reasoning task, etc.). Though it is leading me up to the main thesis.

I remember years ago Matthew Yglesias mentioned he was going to do a bit more reading of books, as opposed to news, to differentiate himself from other pundits. Today he admitted he wasn’t going to make a show of having an informed opinion about the Frankfurt School. I suggested he take time out to read The Dialectical Imagination: A History of the Frankfurt School and the Institute of Social Research, 1923-1950. The modern campus Red Guards don’t know anything about Adorno, Marcuse, or Horkheimer. But the outlines of contemporary project toward cultural revolution and exaltation of the marginalized are all there. Rather than being the origin modern radical movements, I suspect that the Frankfurt School simply provides a useful tool and framework to go about its project.

I do know that some politically moderate scientists who read The Dialectical Imagination, and saw campus politics in a totally different, and more intelligible, light.

Joe Pickrell’s new company, Gencove, Improving ancestry estimates in South Asia.

I said on Twitter that “easiest way to make housing affordable for non-rich is to build more houses for the rich so they won’t buy houses built for non-rich.” What do I mean? It’s all about supply. The well-off will always be first in line for any supply of housing. If you allow for copious development, vertically and horizontally, then the rich can purchase the luxury condos and mansions that they crave, while the middle class and lower class can buy up the more normal housing stock.

The Austin skyline, then and now.

Yazidi sex slave had to choose between son and escape from Isis.

Bangladeshi students test into elite schools. This story is about the entrance examinations for the elite public high schools of New York City. In 2010 the average Bangladeshi family in New York City had a household income of $37,000. I believe in the near future the entrance exams will not be the only criterion for gaining admission. The reality is that Asian American students lack “leadership” and are not “well rounded,” and all the Asian American applicants “look the same.”

A large-scale genome-wide enrichment analysis identifies new trait-associated genes, pathways and tissues across 31 human phenotypes.

Racism Is Everywhere, So Why Not Move South? This article is written in the context of black Americans. But the insights are general. Houston has a cost of living that’s at the national average. It’s the fourth largest city in the United States, and there is a lot of good phở because of the large Vietnamese community.

Patrick Wyman, who sometimes comments on this blog, has a great Fall of Rome podcast.

The Sad, Sexist Past of Bengali Cuisine. Really upper caste Bengali Hindu cuisine.

Utilities fighting against rooftop solar are only hastening their own doom. Not surprised. I have been following Ramez Naam’s commentary on this for years. He’s been on this.

Islamophobes are attacking me because I’m their worst nightmare. Linda Sarsour.

I thought Hillary would win the election. But I told a long-time reader of this weblog who is a Democratic operative that BLM activists getting in Bernie Sanders’ face did not presage well for the direction of the party. Linda Sarsour as the face of progressivism is a massive boon for the Right and Republicans.

Sarsour has left a trail of obnoxious and offensive comments on Twitter. So have many people. For me personally the biggest issue is possible solidarity with Rasmea Odeh. The PFLP is the literal definition of a terrorist organization (though a Marxist, not Islamic, one). But the reality is that her enemies on the Right know that she and her compatriots in the “woke” movement would never exhibit charity toward their political opponents, so they are attempting to destroy her because they know she would do the same to them. That’s where we are in American politics today. You destroy your enemies, or they destroy you. Let’s have fun until the last battle though!

A combined analysis of genetically correlated traits identifies 107 loci associated with intelligence. I guess I’ll start paying attention to when they can explain ~25% of outgroup sample variance. They’re already further than the 7% in this preprint, though that will take a little longer to publish.

Procedures for enumerating and uniformly sampling transmission trees for a known phylogeny.

A reanalysis of Schaefer et al. does not indicate extensive CRISPR/Cas9 mediated off-target editing events.

Evolutionary Action of de novo missense variants across pathways prioritizes genes linked to autism and predicts patient phenotypic severity.